Database of mammalian genes
Home

Home Search Browse Statistics User guide FAQs Links Questions Contribute Download

Gene Protein Transcript Promoter Expression GO/PPI PubMed Cross reference

Expression information for CAB39 (Homo sapiens)
(Information derived after consensus based scoring of curated data)

Tissue/Sub tissueCondition/Sub ConditionExpression statusReliability scoreReferences
CervixCervical cancerTranscribed302
EndometriumEndometrial cancerTranscribed266
UterusNormalTranscribed104
CervixNormalTranscribed74
UterusLeiomyomaTranscribed68
EndometriumNormalTranscribed12
UterusCIN/Cervical dysplasiaTranscribed8
MyometriumNormalTranscribed8
UterusLeiomyosarcomaTranscribed6
EndometriumEndometriosisTranscribed2

NGS based expression information for CAB39 (Homo sapiens)
(Information from literature curation)

StudyConditionExpression status
Llorens et al. Multiple platform assessment of the EGF dependent transcriptome by microarray and deep tag sequencing analysis.
BMC Genomics 2011 Jun 23;12:326.
EGF treated
vs.
untreated control HeLa cells
Down-regulated
Lebedeva et al. Transcriptome-wide analysis of regulatory interactions of the RNA-binding protein HuR.
Mol Cell 2011 Aug 5;43(3):340-52.
ELAVL1/HuR knock down
vs.
mock knockdown HeLa cells
Down-regulated
Yang et al. Genomewide characterization of non-polyadenylated RNAs.
Genome Biol. 2011;12(2):R16.
Poly A(-)
vs.
ploy A(+) RNA fraction of HeLa cells
Down-regulated

EST based expression for CAB39 (Homo sapiens)
(Information obtained from UniGene database)

UniGene cluster ID Tissue/Condition EST count Transcripts per million
Hs.603930Uterus1564
Hs.603930Cervix120
Hs.603930Uterine tumor444
Hs.603930Cervical tumor129